Research output per year
Research output per year
- 1 - 50 out of 200 results
Search results
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2024
A compendium of genetic regulatory effects across pig tissues
Teng, J., Gao, Y., Yin, H., Bai, Z., Liu, S., Zeng, H., Bai, L., Cai, Z., Zhao, B., Li, X., Xu, Z., Lin, Q., Pan, Z., Yang, W., Yu, X., Guan, D., Hou, Y., Keel, B. N., Rohrer, G. A. & Lindholm-Perry, A. K. & 61 others, , 4 Jan 2024, (First published) In: Nature Genetics. 56, 1, p. 112-123 12 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile22 Citations (Scopus)34 Downloads (Pure) -
Anthropogenic events and responses to environmental stress are shaping the genomes of Ethiopian indigenous goats
Belay, S., Belay, G., Nigussie, H., Ahbara, A. M., Tijjani, A., Dessie, T., Tarekegn, G. M., Jian-Lin, H., Mor, S., Woldekiros, H. S., Dobney, K., Lebrasseur, O., Hanotte, O. & Mwacharo, J. M., 28 Jun 2024, In: Scientific Reports. 14, 1, 14908.Research output: Contribution to journal › Article › peer-review
Open AccessFile16 Downloads (Pure) -
Association between a genetic index for digital dermatitis resistance and the presence of digital dermatitis, heel horn erosion and interdigital hyperplasia in Holstein cows
Anagnostopoulos, A., Barden, M., Griffiths, B. E., Bedford, C., Winters, M., Li, B., Coffey, M., Psifidi, A., Banos, G. & Oikonomou, G., Jul 2024, In: Journal of Dairy Science. 107, 7, p. 4915-4925 11 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile37 Downloads (Pure) -
Evolutionary analysis of gene ages across TADs associates chromatin topology with whole-genome duplications
James, C., Trevisan-Herraz, M., Juan, D. & Rico, D., 23 Apr 2024, In: Cell Reports. 43, 4, 113895.Research output: Contribution to journal › Article › peer-review
Open AccessFile13 Downloads (Pure) -
IBD sharing patterns as intra-breed admixture indicators in small ruminants
Blondeau Da Silva, S., Mwacharo, J. M., Li, M., Ahbara, A., Muchadeyi, F. C., Dzomba, E. F., Lenstra, J. A. & Da Silva, A., Jan 2024, In: Heredity. 132, 1, p. 30-42 13 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)32 Downloads (Pure) -
Investigating pedigree- and SNP-associated components of heritability in a wild population of Soay sheep
James, C., Pemberton, J. M., Navarro, P. & Knott, S., Apr 2024, In: Heredity. 132, 4, p. 202-210 9 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile36 Downloads (Pure) -
Mapping and functional characterization of structural variation in 1060 pig genomes
Yang, L., Yin, H., Bai, L., Yao, W., Tao, T., Zhao, Q., Gao, Y., Teng, J., Xu, Z., Lin, Q., Diao, S., Pan, Z., Guan, D., Li, B., Zhou, H., Zhou, Z., Zhao, F., Wang, Q., Pan, Y. & Zhang, Z. & 3 others, , 7 May 2024, In: Genome Biology. 25, 1, 116.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)24 Downloads (Pure) -
Whole-genome resequencing reveals genomic variation and dynamics in Ethiopian indigenous goats
Sheriff, O., Ahbara, A. M., Haile, A., Alemayehu, K., Han, J.-L. & Mwacharo, J. M., 24 May 2024, (First published) In: Frontiers in Genetics. 15, 1353026.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)11 Downloads (Pure) -
Whole-genome resource sequences of 57 indigenous Ethiopian goats
Belay, S., Belay, G., Nigussie, H., Jian-Lin, H., Tijjani, A., Ahbara, A. M., Tarekegn, G. M., Woldekiros, H. S., Mor, S., Dobney, K., Lebrasseur, O., Hanotte, O. & Mwacharo, J., 29 Jan 2024, (First published) In: Scientific data. 11, 1, p. 139 139.Research output: Contribution to journal › Data article › peer-review
Open AccessFile3 Citations (Scopus)30 Downloads (Pure) -
2023
673. Simulating technical, economic and environmental performance of a dairy herd under selection in future climate conditions
Burns, J. G., Eory, V., Mrode, R., Simm, G. & Wall, E., 9 Feb 2023, (First published) Proceedings of 12th World Congress on Genetics Applied to Livestock Production (WCGALP): Technical and species orientated innovations in animal breeding, and contribution of genetics to solving societal challenges. Wageningen Academic Publishers, p. 2777-2781Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
Open AccessFile34 Downloads (Pure) -
AW0521 - Determining potential impacts of Precision Breeding on Animal Welfare FINAL REPORT
Haskell, M., Li, B., Prentice, P. & Dwyer, C., 18 Nov 2023, DEFRA. 104 p.Research output: Book/Report/Policy Brief/Technical Brief › Research report
Open AccessFile165 Downloads (Pure) -
Candidate signatures of positive selection for environmental adaptation in indigenous African cattle: A review
Kambal, S., Tijjani, A., Ibrahim, S. A. E., Ahmed, M. A., Mwacharo, J. M. & Hanotte, O., Dec 2023, In: Animal Genetics. 54, 6, p. 689-708 20 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile3 Citations (Scopus)50 Downloads (Pure) -
Comparing genetic indexes for reducing lameness in dairy cows
Barden, M., Anagnostopoulos, A., Griffiths, B. E., Bedford, C., Oikonomou, G., Winters, M., Li, B., Coffey, M., Banos, G. & Psifidi, A., 18 Nov 2023, (First published) In: Veterinary Record. 193, 10, p. 416-417 2 p.Research output: Contribution to journal › Short communication
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Epigenetic Regulation of miR-25 and Lnc107153 on Expression of Seasonal Estrus Key Gene CHGA in Sheep
Di, R., Fan, Y., He, X., Liu, Q., Wang, X., Gong, Y., Mwacharo, J. M., Wei, C., Liu, Y. & Chu, M., 4 Feb 2023, (First published) In: Biology. 12, 2, 250.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)20 Downloads (Pure) -
2022
Characteristics of piRNAs and their comparative profiling in testes of sheep with different fertility
Di, R., Zhang, R., Mwacharo, J. M., Wang, X., He, X., Liu, Y., Zhang, J., Gong, Y., Zhang, X. & Chu, M., 7 Dec 2022, (First published) In: Frontiers in Genetics. 13, 1078049.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)35 Downloads (Pure) -
Correlations of milk and serum element concentrations with production and management traits in dairy cows
Denholm, S. J., McNeilly, T. N., Bashir, S., Mitchell, M. C., Wall, E. & Sneddon, A. A., Dec 2022, In: Journal of Dairy Science. 105, 12, p. 9726-9737 12 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)36 Downloads (Pure) -
Environment suitability mapping of livestock: A case study of Ethiopian indigenous sheep and goats
Atassi, L., Haile, A., Solomon, D., Demissie, T., Rischkowsky, B., Biradar, C. & Mwacharo, J. M., Nov 2022, In: Small Ruminant Research. 216, 106775.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)88 Downloads (Pure) -
Expression characteristics of piRNAs in ovine luteal phase and follicular phase ovaries
Li, C., Zhang, R., Zhang, Z., Ren, C., Wang, X., He, X., Mwacharo, J. M., Zhang, X., Zhang, J., Di, R. & Chu, M., 8 Sept 2022, (First published) In: Frontiers in Veterinary Science. 9, 921868.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Citations (Scopus)39 Downloads (Pure) -
Genome variation in tick infestation and cryptic divergence in Tunisian indigenous sheep
Ahbara, A. M., Khbou, M. K., Rhomdhane, R., Sassi, L., Gharbi, M., Haile, A., Rekik, M., Rischkowsky, B. & Mwacharo, J. M., 28 Feb 2022, (First published) In: BMC Genomics. 23, 1, 167.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)64 Downloads (Pure) -
Natural adaptation and human selection of northeast African sheep genomes
Ahbara, A. M., Musa, H. H., Robert, C., Abebe, A., Al-Jumaili, A. S., Kebede, A., Latairish, S., Agoub, M. O., Clark, E., Hanotte, O. & Mwacharo, J. M., Sept 2022, In: Genomics. 114, 5, 110448.Research output: Contribution to journal › Article › peer-review
Open AccessFile11 Citations (Scopus)72 Downloads (Pure) -
Non-Coding Transcriptome Provides Novel Insights into the Escherichia coli F17 Susceptibility of Sheep Lamb
Chen, W., Lv, X., Zhang, W., Hu, T., Cao, X., Ren, Z., Getachew, T., Mwacharo, J. M., Haile, A. & Sun, W., 22 Feb 2022, (First published) In: Biology. 11, 3, 348.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Citations (Scopus)58 Downloads (Pure) -
The Effects of Weather on Beef Carcass and Growth Traits
Bunning, H. & Wall, E., Nov 2022, In: Animal. 16, 11, 100657.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)106 Downloads (Pure) -
2021
Automated Processing and Phenotype Extraction of Ovine Medical Images Using a Combined Generative Adversarial Network and Computer Vision Pipeline
Robson, J. F., Denholm, S. J. & Coffey, M., 31 Oct 2021, (First published) In: Sensors. 21, 21, p. 7268 7268.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)66 Downloads (Pure) -
Detection of Novel Variations Related to Litter Size in BMP15 Gene of Luzhong Mutton Sheep ( Ovis aries )
Di, R., Wang, F., Yu, P., Wang, X., He, X., Mwacharo, J. M., Pan, L. & Chu, M., Dec 2021, In: Animals. 11, 12, 3528.Research output: Contribution to journal › Article › peer-review
Open AccessFile15 Citations (Scopus)48 Downloads (Pure) -
Ethiopian indigenous goats offer insights into past and recent demographic dynamics and local adaptation in sub-Saharan African goats
Tarekegn, G. M., Khayatzadeh, N., Liu, B., Osama, S., Haile, A., Rischkowsky, B., Zhang, W., Tesfaye, K., Dessie, T., Mwai, O. A., Djikeng, A. & Mwacharo, J. M., Jul 2021, In: Evolutionary Applications. 14, 7, p. 1716-1731 16 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile9 Citations (Scopus)72 Downloads (Pure) -
Genetic parameters for carcase measurements and age at slaughter in commercial cattle
Pritchard, T., Wall, E. & Coffey, M., Feb 2021, In: Animal. 15, 2, 7 p., 100090.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Citations (Scopus)93 Downloads (Pure) -
Genome divergence and dynamics in the thin-tailed desert sheep from Sudan
Abied, A., Ahbara, A., Berihulay, H., Xu, L., Islam, R., El-Hag, F. M., Rekik, M., Haile, A., Han, J., Ma, Y., Zhao, Q. & Mwacharo, J., 19 Jul 2021, (First published) In: Frontiers in Genetics. 12, 659507.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Citations (Scopus)121 Downloads (Pure) -
Genome‑wide insights on gastrointestinal nematode resistance in autochthonous Tunisian sheep
Ahbara, A., Rouatbi, M., Gharbi, M., Rekik, M., Haile, A., Rischkowsky, B. & Mwacharo, J., 29 Apr 2021, (First published) In: Scientific Reports. 11, 9250.Research output: Contribution to journal › Article › peer-review
Open AccessFile21 Citations (Scopus)80 Downloads (Pure) -
Predicting pregnancy status from mid-infrared spectroscopy in dairy cow milk using deep learning
Brand, W., Wells, A., Smith, S., Denholm, S., Wall, E. & Coffey, M., 1 Apr 2021, In: Journal of Dairy Science. 104, 4, p. 4980-4990 11 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile33 Citations (Scopus)133 Downloads (Pure) -
Whole-Genome Sequence Data Suggest Environmental Adaptation of Ethiopian Sheep Populations
Wiener, P., Robert, C., Ahbara, A., Salavati, M., Abebe, A., Kebede, A., Wragg, D., Friedrich, J., Vasoya, D., Hume, D. A., Djikeng, A., Watson, M., Prendergast, J. G. D., Hanotte, O., Mwacharo, J. M. & Clark, E. L., 1 Mar 2021, In: Genome Biology and Evolution. 13, 3, evab014.Research output: Contribution to journal › Article › peer-review
Open AccessFile19 Citations (Scopus)183 Downloads (Pure) -
2020
Paternal Origins and Migratory Episodes of Domestic Sheep
Deng, J., Xie, X. L., Wang, D. F., Zhao, C., Lv, F. H., Li, X., Yang, J., Yu, J. L., Shen, M., Gao, L., Yang, J. Q., Liu, M. J., Li, W. R., Wang, Y. T., Wang, F., Li, J. Q., Hehua, E. E., Liu, Y. G., Shen, Z. Q. & Ren, Y. L. & 26 others, , 19 Oct 2020, In: Current Biology. 30, 20, p. 4085-4095.e6Research output: Contribution to journal › Report/ Case Report › peer-review
Open AccessFile48 Citations (Scopus)146 Downloads (Pure) -
Predicting bovine tuberculosis status of dairy cows from mid-infrared spectral data of milk using deep learning
Denholm, S., Brand, W., Mitchell, A., Wells, A., Krzyzelewski, T., Smith, S., Wall, E. & Coffey, M., Oct 2020, In: Journal of Dairy Science. 103, 10, p. 9355-9367 13 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile36 Citations (Scopus)131 Downloads (Pure) -
Scotland’s biodiversity progress to 2020 Aichi targets: conserving genetic diversity--development of a national approach for addressing Aichi Biodiversity Target 13 that includes wild species
Hollingsworth, P., O'Brien, D., Ennos, R., Yahr, R., Neaves, L., Ahrends, A., Ballingall, K., Brooker, R., Burke, T., Cavers, S., Dawson, I., Elston, D. A., Kerr, J., Marshall, D., Pakeman, R. J., Trivedi, C., Wall, E., Wright, F. & Ogden, R., 2020, Inverness: Scottish Natural Heritage. 38 p.Research output: Book/Report/Policy Brief/Technical Brief › Commissioned report
Open Access -
2019
Empirical and dynamic approaches for modelling the yield and N content of European grasslands
Dellar, M., Topp, C., Pardo, G., del Prado, A., Fitton, N., Holmes, D., Banos, G. & Wall, E., 1 Dec 2019, In: Environmental Modelling and Software. 122, 104562.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)109 Downloads (Pure) -
Energy profiling of dairy cows from routine milk mid-infrared analysis: Energy Profiling From MIR Spectra
Smith, S., Denholm, S., Coffey, M. & Wall, E., 1 Dec 2019, In: Journal of Dairy Science. 102, 12, p. 11169-11179 11 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile17 Citations (Scopus)172 Downloads (Pure) -
Impact of animal breeding on GHG emissions and farm economics
MacLeod, M., Leinonen, I., Wall, E., Houdijk, J., Eory, V., Burns, J., Vosough Ahmadi, B. & Gomez-Barbero, M., 17 Sept 2019, EUR 29844 EN ed. Publications Office of the European Union, Luxembourg: European Commission. 48 p.Research output: Book/Report/Policy Brief/Technical Brief › Commissioned report
Open Access -
Phenotypic and genetic analysis of milk and serum element concentrations in dairy cows
Denholm, S., Sneddon, A. A., McNeilly, T. N., Bashir, S., Mitchell, M. C. & Wall, E., Dec 2019, In: Journal of Dairy Science. 102, 12, p. 11180-11192 13 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile24 Citations (Scopus)50 Downloads (Pure) -
Short communication: Heritability of methane production and genetic correlations with milk yield and body weight in Holstein-Friesian dairy cows
Breider, I. S., Wall, E. & Garnsworthy, P. C., Aug 2019, In: Journal of Dairy Science. 102, 8, p. 7277-7281 5 p.Research output: Contribution to journal › Short communication › peer-review
Open AccessFile49 Citations (Scopus)59 Downloads (Pure) -
2018
A meta-analysis on the effects of climate change on the yield and quality of European pastures
Dellar, M., Topp, C., Banos, G. & Wall, E., 1 Oct 2018, In: Agriculture, Ecosystems and Environment. 265, p. 413 - 420 8 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile43 Citations (Scopus)96 Downloads (Pure) -
Association of milk MIR-derived body energy traits with fertility parameters in cows
Smith, S., Coffey, M. & Wall, E., Feb 2018, (First published).Research output: Contribution to conference › Poster › peer-review
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Genome-wide associations of immune-associated traits in dairy cows
Denholm, S., McNeilly, T., Coffey, M., Russell, G., Banos, G., Tolkamp, A., Coe, J., Bagnall, A., Mitchell, M. & Wall, E., Feb 2018, (First published).Research output: Contribution to conference › Paper › peer-review
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Genome-wide patterns of homozygosity provide clues about the population history and adaptation of goats
Bertolini, F., Cardoso, T. F., Marras, G., Nicolazzi, E. L., Rothschild, M. F., Amills, M. & AdaptMap consortium, 19 Nov 2018, In: Genetics Selection Evolution. 50, 1, p. 59Research output: Contribution to journal › Article › peer-review
Open Access64 Citations (Scopus) -
Heterosis in cattle crossbreeding schemes in tropical regions: meta-analysis of effects of breed combination, trait type, and climate on level of heterosis
Bunning, H., Wall, E., Chagunda, M., Banos, G. & Simm, G., 20 Oct 2018, (First published) In: Journal of Animal Science. 97, 1, p. 29-34 6 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile66 Downloads (Pure) -
Immune-associated traits measured in milk as proxies for blood serum measurements in dairy cows
Denholm, S., McNeilly, T., Coffey, M., Russell, G., Banos, G. & Wall, E., Apr 2018, (First published).Research output: Contribution to conference › Abstract › peer-review
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Immune-associated traits measured in milk of Holstein-Friesian cows as proxies for blood serum measurements
Denholm, S., McNeilly, T., Banos, G., Coffey, M., Russell, G., Bagnall, A., Mitchell, M. & Wall, E., 1 Nov 2018, In: Journal of Dairy Science. 101, 11, p. 10248 - 10258 11 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Citations (Scopus)133 Downloads (Pure) -
Introgression of exotic Cervus (nippon and canadensis) into red deer (Cervus elaphus) populations in Scotland and the English Lake District
Smith, S., Senn, H., Perez-Espona, S., Wyman, M., Heap, E. & Pemberton, J., 22 Jan 2018, (First published) In: Ecology and Evolution. 8, 4, p. 2122 - 2134 13 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile28 Citations (Scopus)62 Downloads (Pure) -
Vetnomics: a comprehensive online course upskilling practising vets in the contemporary field of genomics in animal breeding
Smith, S., Shutter, T., Wall, E. & Coffey, M., Apr 2018, (First published).Research output: Contribution to conference › Abstract › peer-review
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2017
Estimating genetic and phenotypic parameters of cellular immune-associated traits in dairy cows
Denholm, S., McNeilly, T., Banos, G., Coffey, M., Russell, G., Bagnall, A., Mitchell, M. & Wall, E., 1 Apr 2017, In: Journal of Dairy Science. 100, 4, p. 2850-2862 2 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile21 Citations (Scopus)80 Downloads (Pure) -
Isolation and gene flow in a speciation continuum in newts
Pabijan, M., Zieliński, P., Dudek, K., Stuglik, M. & Babik, W., 1 Nov 2017, In: Molecular Phylogenetics and Evolution. 116, p. 1-12 12 p.Research output: Contribution to journal › Article › peer-review
49 Citations (Scopus) -
Relationships of cellular immune-associated traits with health, fertility and production in dairy cows
Denholm, S., McNeilly, T., Banos, G., Coffey, M., Russell, G., Bagnall, A., Mitchell, M. & Wall, E., Apr 2017, (First published).Research output: Contribution to conference › Abstract › peer-review