Projects per year
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Collaborations and top research areas from the last five years
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HoloRuminant: Understanding microbiomes of the ruminant holobiont.
Dewhurst, R. (PI), Ferguson, H. (CoI), Roehe, R. (CoI), Newbold, J. (CoI), Lima, J. (Researcher) & Cook, R. (PhD Student)
1/04/21 → 31/03/26
Project: Research
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CCI Photonics Bacteriology on Dairy Milkfilms
Lima, J. (PI), Seaton, A. (Consultant) & Christian, M. (Other)
1/11/24 → 31/05/25
Project: Research
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The fungal milk microbiome of dairy cattle and its implications on mastitis
Ferguson, H. (PI), Lima, J. (CoPI), Pollock, J. (Researcher) & Cook, R. (PhD Student)
15/02/23 → 15/08/24
Project: Research
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The use of ruminal metabolic information to select microbial genes for microbiome-driven breeding to mitigate methane emissions from beef cattle
Roehe, R., Nguyen, T., Lima, J. & Martinez Alvaro, M., 11 Jul 2025, (First published) Animal - Science proceedings. 1 ed. Elsevier, Vol. 16. p. 66-67 049Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
File39 Downloads (Pure) -
Use of animal-mounted accelerometers to identify positive welfare in dairy cattle
Ferguson, H., Davison, C., Patricia Do Jardim Goncalves Lima, J., Haskell, M., Dewhurst, R., Michie, C. W., Andonovic, I., Tachtatzis, C., Swan, A., Brooking, M., Truelove, L. & Shewbridge Carter, L., 17 Oct 2025, (First published) In: Dairy Science and Management. 2, 15.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Downloads (Pure) -
Including microbiome information in a multi-trait genomic evaluation: a case study on longitudinal growth performance in beef cattle
Martínez-Álvaro, M., Mattock, J., González-Recio, Ó., Saborío-Montero, A., Weng, Z., Lima, J., Duthie, C.-A., Dewhurst, R., Cleveland, M. A., Watson, M. & Roehe, R., 15 Mar 2024, (First published) In: Genetics Selection Evolution. 56, 1, 16 p., 19.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)19 Downloads (Pure) -
Temporal stability of the rumen microbiome and its longitudinal associations with performance traits in beef cattle
Patricia Do Jardim Goncalves Lima, J., Martinez Alvaro, M., Mattock, J., Auffret, M., Duthie, C.-A., Cleveland, M. A., Dewhurst, R., Watson, M. & Roehe, R., 5 Sept 2024, (First published) In: Scientific Reports. 14, 1, 20772.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Citations (Scopus)1 Downloads (Pure) -
Estimating microbial protein synthesis in the rumen – can ‘omics’ methods provide new insights into a long-standing question?
Patricia Do Jardim Goncalves Lima, J., Ingabire, W., Roehe, R. & Dewhurst, R., 27 Nov 2023, In: Veterinary Sciences. 10, 12, 679.Research output: Contribution to journal › Review article › peer-review
Open AccessFile18 Citations (Scopus)42 Downloads (Pure)
Datasets
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Comparative analysis of the anthelmintic efficacy of European heather extracts on Teladorsagia circumcincta and Trichostrongylus colubriformis egg hatching and larval motility
Shepherd, F. (Creator), Chylinski, C. (Creator), Hutchings, M. R. (Creator), Lima, J. (Creator), Davidson, R. (Creator), Kelly, R. (Creator), Macrae, A. (Creator), Salminen, J.-P. (Creator), Engström, M. T. (Creator), Maurer, V. (Creator), Steinshamn, H. (Creator), Fittje, S. (Creator), Perez, A. M. (Creator), García, R. R. (Creator) & Athanasiadou, S. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.c.6283832, https://springernature.figshare.com/collections/Comparative_analysis_of_the_anthelmintic_efficacy_of_European_heather_extracts_on_Teladorsagia_circumcincta_and_Trichostrongylus_colubriformis_egg_hatching_and_larval_motility/6283832
Dataset