Photo of Marc Auffret
  • Easter Bush, Roslin Institute Building

    EH25 9RG Midlothian

    United Kingdom

20092022
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Fingerprint Dive into the research topics where Marc Auffret is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

  • 1 Similar Profiles
Rumen Medicine & Life Sciences
Microbial Genes Medicine & Life Sciences
Metagenome Medicine & Life Sciences
Rhodococcus Medicine & Life Sciences
Gasoline Medicine & Life Sciences
Aquaculture Medicine & Life Sciences
Hydrocarbons Medicine & Life Sciences
Microbiota Medicine & Life Sciences

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Projects 2017 2022

Research Output 2009 2019

20 Citations (Scopus)
1 Downloads (Pure)

The rumen microbiome as a reservoir of antimicrobial resistance and pathogenicity genes is directly affected by diet in beef cattle

Auffret, MD., Dewhurst, RJ., Duthie, C-A., Rooke, JA., Wallace, RJ., Freeman, TC., Stewart, R., Watson, M. & Roehe, R., 11 Dec 2017, In : Microbiome. 5, 159

Research output: Contribution to journalArticle

Open Access
File
beef cattle
antibiotic resistance
rumen
pathogenicity
diet
64 Citations (Scopus)
6 Downloads (Pure)

Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen

Stewart, RD., Auffret, MD., Warr, A., Wiser, AH., Press, MO., Langford, KW., Liachko, I., Snelling, TJ., Dewhurst, RJ., Walker, AW., Roehe, R. & Watson, M., 28 Feb 2018, In : Nature Communications. 9, 870.

Research output: Contribution to journalArticle

Open Access
File
rumen
cows
genome
carbohydrate metabolism
cattle
11 Citations (Scopus)
1 Downloads (Pure)

Identification, comparison and validation of robust rumen microbial biomarkers for methane emissions using diverse Bos taurus breeds and basal diets

Auffret, MD., Stewart, R., Dewhurst, RJ., Duthie, C-A., Rooke, JA., Wallace, RJ., Freeman, TC., Snelling, TJ., Watson, M. & Roehe, R., 9 Jan 2018, In : Frontiers in Microbiology. 8, 15 p., 2642.

Research output: Contribution to journalArticle

Open Access
File
Rumen
Methane
Biomarkers
Diet
Metagenomics
1 Citation (Scopus)
11 Downloads (Pure)
Open Access
File
Metagenome
Protein Databases
Microbiota
Rumen
Enzymes
19 Downloads (Pure)

Identification of rumen microbial genes involved in pathways linked to appetite, growth and feed conversion efficiency in cattle

Lima, J., Auffret, M., Stewart, R. D., Dewhurst, RJ., Duthie, C-A., Snelling, T. J., Walker, A. W., Freeman, T. C., Watson, M. & Roehe, R., 8 Aug 2019, In : Frontiers in Genetics. 10, 701.

Research output: Contribution to journalArticle

Open Access
File
Microbial Genes
Rumen
Appetite
Microbiota
Growth