Research output per year
Research output per year
Search results
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2021
Breeding strategies for improving smallholder dairy cattle productivity in Sub-Saharan Africa
Chawala, AR., Sánchez-Molano, E., Dewhurst, RJ., Peters, A., Chagunda, M. G. G. & Banos, G., Nov 2021, In: Journal of Animal Breeding and Genetics. 138, 6, p. 668-687 20 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Downloads (Pure) -
Estimation of nitrogen use efficiency for ryegrass-fed dairy cows: model development using diet and animal-based proxy measures
Aizimu, W., Al-Marashdeh, O., Hodge, S., Dewhurst, RJ., Chen, A., Zhao, G., Talukder, S., Edwards, G. R. & Cheng, L., 16 Aug 2021, (First published) In: Dairy. p. 435-451Research output: Contribution to journal › Article › peer-review
Open AccessFile11 Downloads (Pure) -
Methods in cattle physiology and behaviour research – Recommendations from the SmartCow consortium
Mesgaran, S. D. (ed.), Baumont, R. (ed.), Munksgaard, L. (ed.), Humphries, D. (ed.), Kennedy, E. (ed.), Dijkstra, J. (ed.), Dewhurst, RJ. (ed.), Ferguson, HJ. (ed.), Terre, M. (ed.) & Kuhla, B. (ed.), 29 Jan 2021, Online - e book: PUBLISSO.Research output: Book/Report/Policy Brief › Book › peer-review
Open Access -
Review: Markers and proxies to monitor ruminal function and feed efficiency in young ruminants
Cheng, L., Cantalapiedra-Hijar, G., Meale, S., Rugoho, I., Jonker, A., Khan, M. A., Al-Marashdeh, O. & Dewhurst, RJ., Oct 2021, In: Animal. 15, 10, 100337.Research output: Contribution to journal › Review article › peer-review
Open AccessFile4 Downloads (Pure) -
Taxonomic annotation of 16S rRNA sequences of pig intestinal samples using MG-RAST and QIIME2 generated different microbiota compositions
Lima, J., Manning, T., Rutherford, K. M., Baima, E. T., Dewhurst, R. J., Walsh, P. & Roehe, R., Jul 2021, In: Journal of Microbiological Methods. 186, 106235.Research output: Contribution to journal › Article › peer-review
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Unravelling the Role of Rumen Microbial Communities, Genes, and Activities on Milk Fatty Acid Profile Using a Combination of Omics Approaches
Stergiadis, S., Cabeza-Luna, I., Mora-Ortiz, M., Stewart, R. D., Dewhurst, R. J., Humphries, D. J., Watson, M., Roehe, R. & Auffret, M. D., 21 Jan 2021, (First published) In: Frontiers in Microbiology. 11, 590441.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Downloads (Pure) -
2020
A bio-economic model for cost analysis of alternative management strategies in beef finishing systems
Kamilaris, C., Dewhurst, RJ., Vosough Ahmadi, B., Crosson, P. & Alexander, P., Apr 2020, In: Agricultural Systems. 180, 102713.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)7 Downloads (Pure) -
A heat diffusion multilayer network approach for the identification of functional biomarkers in rumen methane emissions
Wang, M., Wang, H., Zheng, H., Dewhurst, RJ. & Roehe, R., 15 Oct 2020, (First published) In: Methods. 192, p. 57-66 10 p., 2020.09.014 .Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus) -
A knowledge-driven network-based analytical framework for the identification of rumen metabolites
Wang, M., Wang, H., Zheng, H., Dewhurst, R. J. & Roehe, R., Jul 2020, In: IEEE Transactions on Nanobioscience. 19, 3, p. 518-526 9 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)16 Downloads (Pure) -
A multilayer co-occurrence network reveals the systemic difference of diet-based rumen microbiome associated with methane yield phenotype
Wang, M., Wang, H., Zheng, H., Dewhurst, R. J. & Roehe, R., 16 Dec 2020, Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020. Park, T., Cho, Y-R., Hu, X. T., Yoo, I., Woo, H. G., Wang, J., Facelli, J., Nam, S. & Kang, M. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2855-2860 6 p. 9313098. (Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Identification of complex rumen microbiome interaction within diverse functional niches as mechanisms affecting the variation of methane emissions in bovine
Martinez Alvaro, M., Auffret, MD., Stewart, R. D., Dewhurst, RJ., Duthie, C-A., Rooke, JA., Wallace, R. J., Shih, B., Freeman, T. C., Watson, M. & Roehe, R., 17 Apr 2020, (First published) In: Frontiers in Microbiology. 11, 659.Research output: Contribution to journal › Article › peer-review
Open AccessFile10 Citations (Scopus)7 Downloads (Pure) -
Identification of microbial genetic capacities and potential mechanisms within the rumen microbiome explaining differences in beef cattle feed efficiency
Auffret, MD., Stewart, R., Dewhurst, RJ., Duthie, C-A., Watson, M. & Roehe, R., 5 Jun 2020, In: Frontiers in Microbiology. 11, p. 1-16 16 p., 1229.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)28 Downloads (Pure) -
Links between the rumen microbiota, methane emissions and feed efficiency of finishing steers offered dietary lipid and nitrate supplementation: Diet effects on methylotrophic and hydrogenotrophic methanogens and links to feed efficiency
Bowen, J. M., Cormican, P., Lister, S. J., McCabe, M. S., Duthie, C-A., Roehe, R. & Dewhurst, RJ., 24 Apr 2020, (First published) In: PLoS ONE. 15, 4, p. e0231759 e0231759.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Citations (Scopus)12 Downloads (Pure) -
Modelling alternative management scenarios of economic and environmental sustainability of beef finishing systems.
Kamilaris, C., Dewhurst, RJ., Sykes, AS. & Alexander, P., 20 Apr 2020, In: Journal of Cleaner Production. 253, 119888.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Citations (Scopus)5 Downloads (Pure) -
Nuclear Magnetic Resonance to Detect Rumen Metabolites Associated with Enteric Methane Emissions from Beef Cattle
Bica, R., Palarea-Albaladejo, J., Kew, W., Uhrin, D., Pacheco, D., Macrae, A. & Dewhurst, RJ., 27 Mar 2020, (First published) In: Scientific Reports. 10, 5578.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus) -
Reducing enteric methane emissions from dairy-beef steers with a blend of essential oils
Miller, G. A., Bowen, J. M., Zweifel, B. & Dewhurst, RJ., Mar 2020, p. 044.Research output: Contribution to conference › Abstract › peer-review
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2019
A knowledge driven mutual information-based analytical framework for the identification of rumen metabolites
Wang, M., Zheng, H., Wang, H., Dewhurst, R. J. & Roehe, R., Nov 2019, Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019. Yoo, I., Bi, J. & Hu, X. T. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 255-260 6 p. 8983182. (Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
1 Citation (Scopus) -
A parsimonious software sensor for estimating the individual dynamic pattern of methane emissions from cattle
Munoz-Tamayo, R., Ramirez Agudelo, JF., Dewhurst, RJ., Miller, G., Vernon, T. & Kettle, H., Jun 2019, In: Animal. 13, 6, p. 1180-1187 8 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)8 Downloads (Pure) -
A Phylogeny-aware Feature Ranking for Classification of Cattle Rumen Microbiome
Wassan, J. T., Zheng, H., Wang, H., Browne, F., Walsh, P., Manning, T., Dewhurst, R. & Roehe, R., Nov 2019, Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019. Yoo, I., Bi, J. & Hu, X. T. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1900-1906 7 p. 8983040. (Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Effect of antibiotic treatments on dairy cow methane production, milk yield and dry matter intake
Hargreaves, PR., March, MD. & Dewhurst, RJ., 9 Apr 2019, Proceedings of the British Society of Animal Science: Animal Science Fit for the Future. 1 ed. Vol. 10. 1 p. 85. (Advances in Animal Biosciences).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Identification of rumen microbial genes involved in pathways linked to appetite, growth and feed conversion efficiency in cattle
Lima, J., Auffret, M., Stewart, R. D., Dewhurst, RJ., Duthie, C-A., Snelling, T. J., Walker, A. W., Freeman, T. C., Watson, M. & Roehe, R., 8 Aug 2019, In: Frontiers in Genetics. 10, 701.Research output: Contribution to journal › Article › peer-review
Open AccessFile18 Citations (Scopus)24 Downloads (Pure) -
Policy Brief: How do different livestock types, sizes and breeds differ in their greenhouse gas emissions?
Dewhurst, RJ. & Miller, G. A., Mar 2019, Scotland's Rural College (SRUC). 13 p.Research output: Book/Report/Policy Brief › Commissioned report
Open Access -
Prediction of methane emissions in sheep using computed tomography (CT) measurements of rumen volume
Lambe, NR., Miller, G. A., McLean, KA., Gordon, J. & Dewhurst, RJ., Apr 2019, p. 152.Research output: Contribution to conference › Abstract › peer-review
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Temporal stability of the rumen microbiota in beef cattle, and response to diet and supplements
Snelling, T. J., Auffret, MD., Duthie, C-A., Stewart, R. D., Watson, M., Dewhurst, RJ., Roehe, R. & Walker, A. W., 19 Nov 2019, (First published) In: Animal Microbiome. 1, p. 1-14 14 p., 16.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Downloads (Pure) -
The effects of a composite chronic stress treatment on fear responses and attention bias in beef cattle
Somarriba Soley, M. A. S., Lonis, W., Roehe, R., Macrae, A., Dewhurst, RJ., Duthie, C-A., Haskell, MJ. & Turner, SP., 5 Aug 2019, p. 142. 1 p.Research output: Contribution to conference › Poster › peer-review
Open Access -
Understanding the relationships between rumen microbiome genes and metabolites to be used for prediction of cattle phenotypes
Wang, M., Zheng, H., Wang, H., Dewhurst, R. J. & Roehe, R., 18 Nov 2019, (First published) 3rd International Conference on Biological Information and Biomedical Engineering, BIBE 2019. VDE Verlag GmbH, p. 297-301 5 p. (3rd International Conference on Biological Information and Biomedical Engineering, BIBE 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
1 Citation (Scopus) -
2018
Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present and future
Huws, SA., Creevey, C., Oyama, LB., Mizrahi, I., Denman, SE., Popova, M., Munoz-tamayo, R., Forano, E., Waters, SM., Hess, M., Tapio, I., Smidt, H., Krizsan, S., Yanez-Ruiz, DR., Belanche, A., Guan, LL., Gruninger, RJ., McAllister, T., Newbold, J., Roehe, R. & 17 others, , 25 Sep 2018, (First published) In: Frontiers in Microbiology. 9, p. 21-61 33 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile86 Citations (Scopus)6 Downloads (Pure) -
An integrative framework for functional analysis of cattle rumen microbiomes
Wassan, J. T., Zheng, H., Browne, F., Bowen, J. M., Walsh, P., Roehe, R., Dewhurst, RJ., Palu, C., Kelly, B. & Wang, H., 12 Mar 2018, Proceedings of 2018 IEEE International Conference on Bioinformatics and Biomedicine. Institute of Electrical and Electronics Engineers Inc., p. 1854 1860 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
2 Citations (Scopus) -
Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen
Stewart, RD., Auffret, MD., Warr, A., Wiser, AH., Press, MO., Langford, KW., Liachko, I., Snelling, TJ., Dewhurst, RJ., Walker, AW., Roehe, R. & Watson, M., 28 Feb 2018, (First published) In: Nature Communications. 9, 870.Research output: Contribution to journal › Article › peer-review
Open AccessFile167 Citations (Scopus)21 Downloads (Pure) -
Effects of dietary nitrate and lipid supplementation on the rumen microbiota associated with methane production
Bowen, J. M., Cormican, P., Lister, S. J., McCabe, M. S., Roehe, R. & Dewhurst, RJ., 9 Apr 2018.Research output: Contribution to conference › Paper › peer-review
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Evaluation of microbial communities associated with the liquid and solid phases of the rumen of cattle offered a diet of perennial ryegrass or white clover
Bowen, JM., McCabe, MS., Lister, SJ., Cormican, P. & Dewhurst, RJ., 8 Oct 2018, (First published) In: Frontiers in Microbiology. 9, 2389.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Citations (Scopus)13 Downloads (Pure) -
Fat accretion measurements strengthen the relationship between feed conversion efficiency and nitrogen isotopic discrimination while rumen microbial genes contribute little
Meale, SJ., Auffret, MD., Watson, M., Morgavi, DP., Cantalapiedra-Hijar, G., Duthie, C-A., Roehe, R. & Dewhurst, RJ., 1 Mar 2018, (First published) In: Scientific Reports. 8, 1, 7 p., 3854.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)8 Downloads (Pure) -
Identification, comparison and validation of robust rumen microbial biomarkers for methane emissions using diverse Bos taurus breeds and basal diets
Auffret, MD., Stewart, R., Dewhurst, RJ., Duthie, C-A., Rooke, JA., Wallace, RJ., Freeman, TC., Snelling, TJ., Watson, M. & Roehe, R., 9 Jan 2018, (First published) In: Frontiers in Microbiology. 8, 15 p., 2642.Research output: Contribution to journal › Article › peer-review
Open AccessFile27 Citations (Scopus)9 Downloads (Pure) -
Improving the inference of co-occurence networks in the bovine rumen microbiome
Zheng, H., Wang, H., Dewhurst, RJ. & Roehe, R., 21 Nov 2018, (First published) In: IEEE/ACM Transactions on Computational Biology and Bioinformatics.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)10 Downloads (Pure) -
The effect of kale cultivar and sowing date on dry matter intake, crop utilization, liveweight gain and body condition score gain of pregnant, non-lactating dry dairy cows in winter in New Zealand
Cheng, L., Groves, CD., de Ruiter, JM., Dewhurst, RJ. & Edwards, GR., 2 Jul 2018, (First published) In: Grass and Forage Science. 73, 4, p. 979 - 985 7 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile17 Downloads (Pure) -
The effect of nutritional strategy on methane emissions, milk yield and fatty acid profiles in Holstein Friesian dairy cows
March, MD., Dewhurst, RJ., Chagunda, MGG. & Hargreaves, PR., Apr 2018, (First published).Research output: Contribution to conference › Poster › peer-review
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2017
Compositional mixed modelling of methane emissions and ruminal volatile fatty acids from individual cattle and multiple experiments
Palarea-Albaladejo, J., Rooke, JA., Nevison, IM. & Dewhurst, RJ., 8 Jun 2017, (First published) In: Journal of Animal Science. 95, 6, p. 2467 - 2480 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile16 Citations (Scopus)36 Downloads (Pure) -
Current available strategies to mitigate greenhouse gas emissions in livestock systems: an animal welfare perspective
Llonch, P., Haskell, MJ., Dewhurst, RJ. & Turner, SP., 2017, In: Animal. 11, 2, p. 274 - 284 11 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile36 Citations (Scopus)180 Downloads (Pure) -
Integrated metagenomic analyses of the rumen microbiome of cattle reveals key biological mechanisms associated with methane traits
Wang, H., Zheng, H., Browne, F., Roehe, R., Dewhurst, RJ., Engel, F., Hemmje, M., Lu, X. & Walsh, P., 9 Jun 2017, (First published) In: Methods. 124, p. 108 - 119 12 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile14 Citations (Scopus)34 Downloads (Pure) -
Invited review: Large-scale indirect measurements for enteric methane emissions in dairy cattle: a review of proxies and their potential for use in management and breeding decisions
Negussie, E., de Haas, Y., Dehareng, F., Dewhurst, RJ., Dijkstra, J., Gengler, N., Morgavi, DP., Soyeurt, H., van Gastelen, S., Yan, T. & Biscarini, F., 1 Feb 2017, (First published) In: Journal of Dairy Science. 100, 4, p. 2433 - 2453 21 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile70 Citations (Scopus)12 Downloads (Pure) -
Nitrogen isotopic fractionation as a biomarker for nitrogen use efficiency in ruminants: a meta analysis
Cantalapiedra-Hijar, G., Dewhurst, RJ., Cheng, L., Cabrita, ARJ., Fonseca, AJM., Noziere, P., Makowski, D., Fouillet, H. & Ortigues-Marty, I., 29 Dec 2017, (First published) In: Animal. 12, 9, p. 1827 - 1837 11 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile18 Citations (Scopus)22 Downloads (Pure) -
The rumen microbiome as a reservoir of antimicrobial resistance and pathogenicity genes is directly affected by diet in beef cattle
Auffret, MD., Dewhurst, RJ., Duthie, C-A., Rooke, JA., Wallace, RJ., Freeman, TC., Stewart, R., Watson, M. & Roehe, R., 11 Dec 2017, (First published) In: Microbiome. 5, 159.Research output: Contribution to journal › Article › peer-review
Open AccessFile47 Citations (Scopus)7 Downloads (Pure) -
2016
Analysis of rumen microbial community in cattle through the integration of metagenomic and network-based approaches
Wang, H., Zheng, H., Browne, F., Roehe, R., Dewhurst, R. J., Engel, F., Hemmje, M. & Walsh, P., 2016, 2016 Ieee International Conference on Bioinformatics and Biomedicine (Bibm).Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
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A network analysis of methane and feed conversion genes in the rumen microbial community
Browne, F., Wang, H., Zheng, H., Roehe, R., Dewhurst, R. J. & Walsh, P., 2016, 2016 Ieee International Conference on Bioinformatics and Biomedicine (Bibm).Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
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Bovine host genetic variation influences rumen microbial methane production with best selection criterion for low methane emitting and efficiently feed converting hosts based on metagenomic gene abundance
Roehe, R., Dewhurst, RJ., Duthie, C-A., Rooke, JA., McKain, N., Ross, DW., Hyslop, JJ., Waterhouse, A., Freeman, TC., Watson, M. & Wallace, RJ., 18 Feb 2016, (First published) In: PLoS Genetics. 12, 2, p. 3 - 9 7 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile153 Citations (Scopus)4 Downloads (Pure) -
The effect of dietary water soluble carbohydrate to nitrogen ratio on nitrogen partitioning and isotopic fractionation of lactating goats offered a high-nitrogen diet
Cheng, L., Edwards, GR., Dewhurst, RJ., Nicol, AM. & Pacheco, D., May 2016, In: Animal. 10, 5, p. 779 - 785 7 p.Research output: Contribution to journal › Article › peer-review
4 Citations (Scopus) -
The use of faecal NIRS to assess diet effects on digestive processes in steers
Bowen, J. M., Lister, S. J., Sanderson, R. & Dewhurst, RJ., 29 Aug 2016.Research output: Contribution to conference › Abstract › peer-review
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The use of laser diffraction to assess diet effects on faecal particle size of steers
Bowen, J. M., Sherriff, S., Lister, S. J. & Dewhurst, RJ., 29 Aug 2016.Research output: Contribution to conference › Abstract › peer-review
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2015
Associative effects of ensiling mixtures of sweet sorghum and alfalfa on nutritive value, fermentation and methane characteristics
Zhang, SJ., Chaudhry, AS., Osman, A., Shi, CQ., Edwards, GR., Dewhurst, RJ. & Cheng, L., 2015, (First published) In: Animal Feed Science and Technology. 206, p. 29 - 38Research output: Contribution to journal › Article › peer-review
Open AccessFile29 Citations (Scopus)33 Downloads (Pure) -
Effects of feed intake and genetics on tissue nitrogen-15 enrichment and feed conversion efficiency in sheep
Cheng, L., Logan, CM., Dewhurst, RJ., Hodge, S., Zhou, H. & Edwards, GR., 2015, (First published) In: Journal of Animal Science. 93, 12, p. 5849 - 5855Research output: Contribution to journal › Article › peer-review
4 Citations (Scopus)