Research output per year
Research output per year
- 1 - 50 out of 165 results
Search results
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2022
Bovine host genome acts on rumen microbiome function linked to methane emissions
Martinez Alvaro, MM., Auffret, M., Duthie, C-A., Dewhurst, RJ., Cleveland, M. A., Watson, M. & Roehe, R., 12 Apr 2022, (First published) In: Communications Biology. 5, 350.Research output: Contribution to journal › Article › peer-review
Open AccessFile9 Downloads (Pure) -
Identifying cattle with superior growth feed efficiency through their natural 15N abundance and plasma urea concentration: A meta-analysis
Cantalapiedra-Hijar, G., Morel, I., Sepchat, B., Chanteleuze, C., Miller, G. A., Duthie, C-A., Ortigues-Marty, I. & Dewhurst, RJ., 1 Jun 2022, (First published) In: Peer Community Journal. 2, e31.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Downloads (Pure) -
Identifying Hub Nodes and Sub-networks from Cattle Rumen Microbiome Multilayer Networks
Wang, M., Wang, H., Zheng, H., Dewhurst, R. J. & Roehe, R., 8 Feb 2022, (First published) Advanced Computing - 11th International Conference, IACC 2021. Garg, D., Jagannathan, S., Gupta, A., Garg, L. & Gupta, S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 165-175 11 p. (Communications in Computer and Information Science; vol. 1528 CCIS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Measurement Duration but Not Distance, Angle, and Neighbour-Proximity Affects Precision in Enteric Methane Emissions when Using the Laser Methane Detector Technique in Lactating Dairy Cows: Measurement Duration but Not Distance, Angle, and Neighbour-Proximity Affects Precision in Enteric Methane Emissions
Bore, R., Bruder, T., Jabri El, M., March, MD., Hargreaves, PR., Rouille, B., Dewhurst, RJ. & Chagunda, M. G. G., 18 May 2022, (First published) In: Animals. 12, 10, 9 p., 1295.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Downloads (Pure) -
Methane Emissions and Rumen Metabolite Concentrations in Cattle Fed Two Different Silages
Bica, RB., Palarea-Albaladejo, J., Patricia Do Jardim Goncalves Lima, JPL., Uhrin, D., Miller, G. A., Bowen, J. M., Pacheco, D., Macrae, A. & Dewhurst, RJ., 31 Mar 2022, (First published) In: Scientific Reports. 12, 5441.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Downloads (Pure) -
Nitrogen isotopic discrimination as a biomarker of between cow variation in the efficiency of nitrogen utilization for milk production: A meta-analysis
Correa-Luna, M., Johansen, M., Noziere, P., Chanteleuze, C., Nasrollahi, S. M., Lund, P., Larsen, M., Bayat, A-R., Crompton, L., Reynolds, C., Froidmont, E., Edouard, N., Dewhurst, RJ., Bahloul, L., Martin, C. & Cantalapiedra-Hijar, G., Jun 2022, In: Journal of Dairy Science. 105, 6, p. 5004-5023 20 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Downloads (Pure) -
Opinion paper: How can we achieve standards and common guidelines for experimental studies with cattle?
Kuhla, B., Dewhurst, RJ., Dijkstra, J., Ferguson, HJ., Humphries, DJ., Kennedy, E., Lund, P., Martin, C., Munksgaard, L., O'Donovan, M., Reynolds, C., Terre, M., Veissier, I. & Baumont, R., Jul 2022, In: Animal. 16, 7, 3 p., 100563.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Downloads (Pure) -
Valorization of dairy waste and by-products through microbial bioprocesses
Usmani, Z., Sharma, M., Gaffey, J., Sharma, M., Dewhurst, R. J., Moreau, B., Newbold, J., Clark, W., Thakur, V. K. & Gupta, V. K., Feb 2022, In: Bioresource Technology. 346, 126444.Research output: Contribution to journal › Review article › peer-review
3 Citations (Scopus) -
2021
Breeding strategies for improving smallholder dairy cattle productivity in Sub-Saharan Africa
Chawala, AR., Sánchez-Molano, E., Dewhurst, RJ., Peters, A., Chagunda, M. G. G. & Banos, G., Nov 2021, In: Journal of Animal Breeding and Genetics. 138, 6, p. 668-687 20 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile43 Downloads (Pure) -
Comparison of HPLC and NMR for quantification of the main volatile fatty acids in rumen digesta
Wang, M., Wang, H., Zheng, H., Uhrin, D., Dewhurst, R. J. & Roehe, R., 21 Dec 2021, (First published) In: Scientific Reports. 11, 1, 24337.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)40 Downloads (Pure) -
Effect of ammonia concentration on rumen microbial protein production in vitro.
Dewhurst, RJ. & Newbold, J., 15 Nov 2021, (First published) In: British Journal of Nutrition. p. 1-7 7 p.Research output: Contribution to journal › Comment/debate
Open AccessFile5 Downloads (Pure) -
Estimation of nitrogen use efficiency for ryegrass-fed dairy cows: model development using diet and animal-based proxy measures
Aizimu, W., Al-Marashdeh, O., Hodge, S., Dewhurst, RJ., Chen, A., Zhao, G., Talukder, S., Edwards, G. R. & Cheng, L., 16 Aug 2021, (First published) In: Dairy. p. 435-451Research output: Contribution to journal › Article › peer-review
Open AccessFile32 Downloads (Pure) -
Methods in cattle physiology and behaviour research – Recommendations from the SmartCow consortium
Mesgaran, S. D. (ed.), Baumont, R. (ed.), Munksgaard, L. (ed.), Humphries, D. (ed.), Kennedy, E. (ed.), Dijkstra, J. (ed.), Dewhurst, RJ. (ed.), Ferguson, HJ. (ed.), Terre, M. (ed.) & Kuhla, B. (ed.), 29 Jan 2021, Online - e book: PUBLISSO.Research output: Book/Report/Policy Brief/Technical Brief › Book › peer-review
Open Access -
Review: Markers and proxies to monitor ruminal function and feed efficiency in young ruminants
Cheng, L., Cantalapiedra-Hijar, G., Meale, S., Rugoho, I., Jonker, A., Khan, M. A., Al-Marashdeh, O. & Dewhurst, RJ., Oct 2021, In: Animal. 15, 10, 100337.Research output: Contribution to journal › Review article › peer-review
Open AccessFile23 Downloads (Pure) -
Taxonomic annotation of 16S rRNA sequences of pig intestinal samples using MG-RAST and QIIME2 generated different microbiota compositions
Lima, J., Manning, T., Rutherford, K. M., Baima, E. T., Dewhurst, R. J., Walsh, P. & Roehe, R., Jul 2021, In: Journal of Microbiological Methods. 186, 106235.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)6 Downloads (Pure) -
The effect of sheep genetic merit and feed allowance on nitrogen partitioning and isotopic discrimination.
Khanaki, H., Dewhurst, RJ., Leury, B., Cantalapiedra-Hijar, G., Edwards, G. R., Logan, C. M. & Cheng, L., Dec 2021, In: Animal. 15, 12, 100400.Research output: Contribution to journal › Article › peer-review
Open AccessFile9 Downloads (Pure) -
Unravelling the Role of Rumen Microbial Communities, Genes, and Activities on Milk Fatty Acid Profile Using a Combination of Omics Approaches
Stergiadis, S., Cabeza-Luna, I., Mora-Ortiz, M., Stewart, R. D., Dewhurst, R. J., Humphries, D. J., Watson, M., Roehe, R. & Auffret, M. D., 21 Jan 2021, (First published) In: Frontiers in Microbiology. 11, 590441.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Citations (Scopus)7 Downloads (Pure) -
2020
A bio-economic model for cost analysis of alternative management strategies in beef finishing systems
Kamilaris, C., Dewhurst, RJ., Vosough Ahmadi, B., Crosson, P. & Alexander, P., Apr 2020, In: Agricultural Systems. 180, 102713.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)9 Downloads (Pure) -
A heat diffusion multilayer network approach for the identification of functional biomarkers in rumen methane emissions
Wang, M., Wang, H., Zheng, H., Dewhurst, RJ. & Roehe, R., 15 Oct 2020, (First published) In: Methods. 192, p. 57-66 10 p., 2020.09.014 .Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)4 Downloads (Pure) -
A knowledge-driven network-based analytical framework for the identification of rumen metabolites
Wang, M., Wang, H., Zheng, H., Dewhurst, R. J. & Roehe, R., Jul 2020, In: IEEE Transactions on Nanobioscience. 19, 3, p. 518-526 9 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)23 Downloads (Pure) -
A multilayer co-occurrence network reveals the systemic difference of diet-based rumen microbiome associated with methane yield phenotype
Wang, M., Wang, H., Zheng, H., Dewhurst, R. J. & Roehe, R., 16 Dec 2020, Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020. Park, T., Cho, Y-R., Hu, X. T., Yoo, I., Woo, H. G., Wang, J., Facelli, J., Nam, S. & Kang, M. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2855-2860 6 p. 9313098. (Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
1 Citation (Scopus) -
Identification of complex rumen microbiome interaction within diverse functional niches as mechanisms affecting the variation of methane emissions in bovine
Martinez Alvaro, M., Auffret, MD., Stewart, R. D., Dewhurst, RJ., Duthie, C-A., Rooke, JA., Wallace, R. J., Shih, B., Freeman, T. C., Watson, M. & Roehe, R., 17 Apr 2020, (First published) In: Frontiers in Microbiology. 11, 659.Research output: Contribution to journal › Article › peer-review
Open AccessFile19 Citations (Scopus)14 Downloads (Pure) -
Identification of microbial genetic capacities and potential mechanisms within the rumen microbiome explaining differences in beef cattle feed efficiency
Auffret, MD., Stewart, R., Dewhurst, RJ., Duthie, C-A., Watson, M. & Roehe, R., 5 Jun 2020, In: Frontiers in Microbiology. 11, p. 1-16 16 p., 1229.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Citations (Scopus)39 Downloads (Pure) -
Links between the rumen microbiota, methane emissions and feed efficiency of finishing steers offered dietary lipid and nitrate supplementation: Diet effects on methylotrophic and hydrogenotrophic methanogens and links to feed efficiency
Bowen, J. M., Cormican, P., Lister, S. J., McCabe, M. S., Duthie, C-A., Roehe, R. & Dewhurst, RJ., 24 Apr 2020, (First published) In: PLoS ONE. 15, 4, p. e0231759 e0231759.Research output: Contribution to journal › Article › peer-review
Open AccessFile8 Citations (Scopus)23 Downloads (Pure) -
Modelling alternative management scenarios of economic and environmental sustainability of beef finishing systems.
Kamilaris, C., Dewhurst, RJ., Sykes, AS. & Alexander, P., 20 Apr 2020, In: Journal of Cleaner Production. 253, 119888.Research output: Contribution to journal › Article › peer-review
Open AccessFile8 Citations (Scopus)22 Downloads (Pure) -
Nuclear Magnetic Resonance to Detect Rumen Metabolites Associated with Enteric Methane Emissions from Beef Cattle
Bica, R., Palarea-Albaladejo, J., Kew, W., Uhrin, D., Pacheco, D., Macrae, A. & Dewhurst, RJ., 27 Mar 2020, (First published) In: Scientific Reports. 10, 5578.Research output: Contribution to journal › Article › peer-review
Open AccessFile8 Citations (Scopus)3 Downloads (Pure) -
Reducing enteric methane emissions from dairy-beef steers with a blend of essential oils
Miller, G. A., Bowen, J. M., Zweifel, B. & Dewhurst, RJ., Mar 2020, p. 044.Research output: Contribution to conference › Abstract › peer-review
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2019
A knowledge driven mutual information-based analytical framework for the identification of rumen metabolites
Wang, M., Zheng, H., Wang, H., Dewhurst, R. J. & Roehe, R., Nov 2019, Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019. Yoo, I., Bi, J. & Hu, X. T. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 255-260 6 p. 8983182. (Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
1 Citation (Scopus) -
A parsimonious software sensor for estimating the individual dynamic pattern of methane emissions from cattle
Munoz-Tamayo, R., Ramirez Agudelo, JF., Dewhurst, RJ., Miller, G., Vernon, T. & Kettle, H., Jun 2019, In: Animal. 13, 6, p. 1180-1187 8 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)11 Downloads (Pure) -
A Phylogeny-aware Feature Ranking for Classification of Cattle Rumen Microbiome
Wassan, J. T., Zheng, H., Wang, H., Browne, F., Walsh, P., Manning, T., Dewhurst, R. & Roehe, R., Nov 2019, Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019. Yoo, I., Bi, J. & Hu, X. T. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1900-1906 7 p. 8983040. (Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Effect of antibiotic treatments on dairy cow methane production, milk yield and dry matter intake
Hargreaves, PR., March, MD. & Dewhurst, RJ., 9 Apr 2019, Proceedings of the British Society of Animal Science: Animal Science Fit for the Future. 1 ed. Vol. 10. 1 p. 85. (Advances in Animal Biosciences).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Identification of rumen microbial genes involved in pathways linked to appetite, growth and feed conversion efficiency in cattle
Lima, J., Auffret, M., Stewart, R. D., Dewhurst, RJ., Duthie, C-A., Snelling, T. J., Walker, A. W., Freeman, T. C., Watson, M. & Roehe, R., 8 Aug 2019, In: Frontiers in Genetics. 10, 701.Research output: Contribution to journal › Article › peer-review
Open AccessFile23 Citations (Scopus)33 Downloads (Pure) -
Policy Brief: How do different livestock types, sizes and breeds differ in their greenhouse gas emissions?
Dewhurst, RJ. & Miller, G. A., Mar 2019, Scotland's Rural College (SRUC). 13 p.Research output: Book/Report/Policy Brief/Technical Brief › Commissioned report
Open Access -
Prediction of methane emissions in sheep using computed tomography (CT) measurements of rumen volume
Lambe, NR., Miller, G. A., McLean, KA., Gordon, J. & Dewhurst, RJ., Apr 2019, p. 152.Research output: Contribution to conference › Abstract › peer-review
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Temporal stability of the rumen microbiota in beef cattle, and response to diet and supplements
Snelling, T. J., Auffret, MD., Duthie, C-A., Stewart, R. D., Watson, M., Dewhurst, RJ., Roehe, R. & Walker, A. W., 19 Nov 2019, (First published) In: Animal Microbiome. 1, p. 1-14 14 p., 16.Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Downloads (Pure) -
The effects of a composite chronic stress treatment on fear responses and attention bias in beef cattle
Somarriba Soley, M. A. S., Lonis, W., Roehe, R., Macrae, A., Dewhurst, RJ., Duthie, C-A., Haskell, MJ. & Turner, SP., 5 Aug 2019, p. 142. 1 p.Research output: Contribution to conference › Poster › peer-review
Open Access -
Understanding the relationships between rumen microbiome genes and metabolites to be used for prediction of cattle phenotypes
Wang, M., Zheng, H., Wang, H., Dewhurst, R. J. & Roehe, R., 18 Nov 2019, (First published) 3rd International Conference on Biological Information and Biomedical Engineering, BIBE 2019. VDE Verlag GmbH, p. 297-301 5 p. (3rd International Conference on Biological Information and Biomedical Engineering, BIBE 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
1 Citation (Scopus) -
2018
Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present and future
Huws, SA., Creevey, C., Oyama, LB., Mizrahi, I., Denman, SE., Popova, M., Munoz-tamayo, R., Forano, E., Waters, SM., Hess, M., Tapio, I., Smidt, H., Krizsan, S., Yanez-Ruiz, DR., Belanche, A., Guan, LL., Gruninger, RJ., McAllister, T., Newbold, J., Roehe, R. & 17 others, , 25 Sep 2018, (First published) In: Frontiers in Microbiology. 9, p. 21-61 33 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile113 Citations (Scopus)20 Downloads (Pure) -
An integrative framework for functional analysis of cattle rumen microbiomes
Wassan, J. T., Zheng, H., Browne, F., Bowen, J. M., Walsh, P., Roehe, R., Dewhurst, RJ., Palu, C., Kelly, B. & Wang, H., 12 Mar 2018, Proceedings of 2018 IEEE International Conference on Bioinformatics and Biomedicine. Institute of Electrical and Electronics Engineers Inc., p. 1854 1860 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
2 Citations (Scopus) -
Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen
Stewart, RD., Auffret, MD., Warr, A., Wiser, AH., Press, MO., Langford, KW., Liachko, I., Snelling, TJ., Dewhurst, RJ., Walker, AW., Roehe, R. & Watson, M., 28 Feb 2018, (First published) In: Nature Communications. 9, 870.Research output: Contribution to journal › Article › peer-review
Open AccessFile201 Citations (Scopus)25 Downloads (Pure) -
Effects of dietary nitrate and lipid supplementation on the rumen microbiota associated with methane production
Bowen, J. M., Cormican, P., Lister, S. J., McCabe, M. S., Roehe, R. & Dewhurst, RJ., 9 Apr 2018.Research output: Contribution to conference › Paper › peer-review
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Evaluation of microbial communities associated with the liquid and solid phases of the rumen of cattle offered a diet of perennial ryegrass or white clover
Bowen, JM., McCabe, MS., Lister, SJ., Cormican, P. & Dewhurst, RJ., 8 Oct 2018, (First published) In: Frontiers in Microbiology. 9, 2389.Research output: Contribution to journal › Article › peer-review
Open AccessFile9 Citations (Scopus)17 Downloads (Pure) -
Fat accretion measurements strengthen the relationship between feed conversion efficiency and nitrogen isotopic discrimination while rumen microbial genes contribute little
Meale, SJ., Auffret, MD., Watson, M., Morgavi, DP., Cantalapiedra-Hijar, G., Duthie, C-A., Roehe, R. & Dewhurst, RJ., 1 Mar 2018, (First published) In: Scientific Reports. 8, 1, 7 p., 3854.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)10 Downloads (Pure) -
Identification, comparison and validation of robust rumen microbial biomarkers for methane emissions using diverse Bos taurus breeds and basal diets
Auffret, MD., Stewart, R., Dewhurst, RJ., Duthie, C-A., Rooke, JA., Wallace, RJ., Freeman, TC., Snelling, TJ., Watson, M. & Roehe, R., 9 Jan 2018, (First published) In: Frontiers in Microbiology. 8, 15 p., 2642.Research output: Contribution to journal › Article › peer-review
Open AccessFile36 Citations (Scopus)14 Downloads (Pure) -
Improving the inference of co-occurence networks in the bovine rumen microbiome
Zheng, H., Wang, H., Dewhurst, RJ. & Roehe, R., 21 Nov 2018, (First published) In: IEEE/ACM Transactions on Computational Biology and Bioinformatics.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Citation (Scopus)14 Downloads (Pure) -
The effect of kale cultivar and sowing date on dry matter intake, crop utilization, liveweight gain and body condition score gain of pregnant, non-lactating dry dairy cows in winter in New Zealand
Cheng, L., Groves, CD., de Ruiter, JM., Dewhurst, RJ. & Edwards, GR., 2 Jul 2018, (First published) In: Grass and Forage Science. 73, 4, p. 979 - 985 7 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile21 Downloads (Pure) -
The effect of nutritional strategy on methane emissions, milk yield and fatty acid profiles in Holstein Friesian dairy cows
March, MD., Dewhurst, RJ., Chagunda, MGG. & Hargreaves, PR., Apr 2018, (First published).Research output: Contribution to conference › Poster › peer-review
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2017
Compositional mixed modelling of methane emissions and ruminal volatile fatty acids from individual cattle and multiple experiments
Palarea-Albaladejo, J., Rooke, JA., Nevison, IM. & Dewhurst, RJ., 8 Jun 2017, (First published) In: Journal of Animal Science. 95, 6, p. 2467 - 2480 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile17 Citations (Scopus)40 Downloads (Pure) -
Current available strategies to mitigate greenhouse gas emissions in livestock systems: an animal welfare perspective
Llonch, P., Haskell, MJ., Dewhurst, RJ. & Turner, SP., 2017, In: Animal. 11, 2, p. 274 - 284 11 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile43 Citations (Scopus)543 Downloads (Pure) -
Integrated metagenomic analyses of the rumen microbiome of cattle reveals key biological mechanisms associated with methane traits
Wang, H., Zheng, H., Browne, F., Roehe, R., Dewhurst, RJ., Engel, F., Hemmje, M., Lu, X. & Walsh, P., 9 Jun 2017, (First published) In: Methods. 124, p. 108 - 119 12 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile14 Citations (Scopus)42 Downloads (Pure)