Detection and analysis of genetic variation in Hordeum spontaneum populations from Israel using RAPD markers

I. K. Dawson, K. J. Chalmers, R. Waugh, W. Powell

Research output: Contribution to journalArticle

168 Citations (Scopus)

Abstract

Randomly amplified polymorphic DNA (RAPD) markers were used to analyse genetic diversity within and between Hordeum spontaneum populations sampled from Israel. Nei's index of genetic differentiation was used to partition diversity into within and between population components. Fifty‐seven per cent of the variation detected was partitioned within 10 H. spontaneum populations. Using principal component and multiple regression analysis, part of the variation detected between populations was seen to be associated with certain ecogeographical factors. Fifty‐eight per cent of the distribution of the phenotypic frequencies of three RAPD phenotypes detected using a single primer in 20 H. spontaneum populations could be accounted for by four ecogeographical variables, suggesting adaptive variation at certain RAPD loci. Copyright © 1993, Wiley Blackwell. All rights reserved
Original languageEnglish
Pages (from-to)151-159
Number of pages9
JournalMolecular Ecology
Volume2
Issue number3
DOIs
Publication statusPrint publication - 1993
Externally publishedYes

Fingerprint

Hordeum vulgare subsp. spontaneum
Israel
Hordeum
Genetic Markers
genetic variation
DNA
genetic markers
Population
genetic differentiation
multiple regression
phenotype
regression analysis
Regression Analysis
detection
analysis
marker
Phenotype
loci

Keywords

  • Hordeum spontaneum, population genetics
  • RAPDs
  • genetic diversity

Cite this

@article{6bde9cd69c964ed796e8fac584f2b22c,
title = "Detection and analysis of genetic variation in Hordeum spontaneum populations from Israel using RAPD markers",
abstract = "Randomly amplified polymorphic DNA (RAPD) markers were used to analyse genetic diversity within and between Hordeum spontaneum populations sampled from Israel. Nei's index of genetic differentiation was used to partition diversity into within and between population components. Fifty‐seven per cent of the variation detected was partitioned within 10 H. spontaneum populations. Using principal component and multiple regression analysis, part of the variation detected between populations was seen to be associated with certain ecogeographical factors. Fifty‐eight per cent of the distribution of the phenotypic frequencies of three RAPD phenotypes detected using a single primer in 20 H. spontaneum populations could be accounted for by four ecogeographical variables, suggesting adaptive variation at certain RAPD loci. Copyright {\circledC} 1993, Wiley Blackwell. All rights reserved",
keywords = "Hordeum spontaneum, population genetics, RAPDs, genetic diversity",
author = "Dawson, {I. K.} and Chalmers, {K. J.} and R. Waugh and W. Powell",
year = "1993",
doi = "10.1111/j.1365-294X.1993.tb00104.x",
language = "English",
volume = "2",
pages = "151--159",
journal = "Molecular Ecology",
issn = "0962-1083",
publisher = "Wiley Blackwell",
number = "3",

}

Detection and analysis of genetic variation in Hordeum spontaneum populations from Israel using RAPD markers. / Dawson, I. K.; Chalmers, K. J.; Waugh, R.; Powell, W.

In: Molecular Ecology, Vol. 2, No. 3, 1993, p. 151-159.

Research output: Contribution to journalArticle

TY - JOUR

T1 - Detection and analysis of genetic variation in Hordeum spontaneum populations from Israel using RAPD markers

AU - Dawson, I. K.

AU - Chalmers, K. J.

AU - Waugh, R.

AU - Powell, W.

PY - 1993

Y1 - 1993

N2 - Randomly amplified polymorphic DNA (RAPD) markers were used to analyse genetic diversity within and between Hordeum spontaneum populations sampled from Israel. Nei's index of genetic differentiation was used to partition diversity into within and between population components. Fifty‐seven per cent of the variation detected was partitioned within 10 H. spontaneum populations. Using principal component and multiple regression analysis, part of the variation detected between populations was seen to be associated with certain ecogeographical factors. Fifty‐eight per cent of the distribution of the phenotypic frequencies of three RAPD phenotypes detected using a single primer in 20 H. spontaneum populations could be accounted for by four ecogeographical variables, suggesting adaptive variation at certain RAPD loci. Copyright © 1993, Wiley Blackwell. All rights reserved

AB - Randomly amplified polymorphic DNA (RAPD) markers were used to analyse genetic diversity within and between Hordeum spontaneum populations sampled from Israel. Nei's index of genetic differentiation was used to partition diversity into within and between population components. Fifty‐seven per cent of the variation detected was partitioned within 10 H. spontaneum populations. Using principal component and multiple regression analysis, part of the variation detected between populations was seen to be associated with certain ecogeographical factors. Fifty‐eight per cent of the distribution of the phenotypic frequencies of three RAPD phenotypes detected using a single primer in 20 H. spontaneum populations could be accounted for by four ecogeographical variables, suggesting adaptive variation at certain RAPD loci. Copyright © 1993, Wiley Blackwell. All rights reserved

KW - Hordeum spontaneum, population genetics

KW - RAPDs

KW - genetic diversity

UR - http://www.mendeley.com/research/detection-analysis-genetic-variation-hordeum-spontaneum-populations-israel-using-rapd-markers

U2 - 10.1111/j.1365-294X.1993.tb00104.x

DO - 10.1111/j.1365-294X.1993.tb00104.x

M3 - Article

VL - 2

SP - 151

EP - 159

JO - Molecular Ecology

JF - Molecular Ecology

SN - 0962-1083

IS - 3

ER -