Genetic diversity and population structure of Malawi zebu cattle

W Changadeya, AJD Mbali, JC Nyirenda, MGG Chagunda, E Kaunda

Research output: Contribution to journalArticle

Abstract

The aim of this study was to determine the genetic diversity and population structure of Malawi Zebu cattle using microsatellite DNA markers. Blood samples were collected in 5 administrative districts of Malawi and analysed at the DNA Laboratory, University of Malawi, Chancellor College, Zomba, Malawi. As a comparison base, samples were collected from a group of Brahman cattle performing at a commercial herd in Zomba district. A total of 15 sites were sampled giving a total of 541 random blood samples. The number of alleles per locus ranged from 6 to 15 with the minimum allele length of 98 base pairs (bp) and maximum allele length of 160bp. Malawi Zebu cattle were found to be more polymorphic than Brahman. Most of the Malawi zebu populations were not in Hardy-Weinberg equilibrium and more than 95% of the population-locus combinations were heterozygous. Gene flow among the populations was higher between districts than within districts, 2.04-2.40 migrants per generation between districts versus 0.36-1.27 migrants per generation within districts). The exchange of genetic material is influenced more by socioeconomic factors like trade and payment of dowry than any conscience genetic improvement practice. Three main clusters of Malawi Zebu were identified in the sampled population. With no organized conservation and improvement programmes currently available, there is need to mobilize on-farm genetic conservation and utilisation programmes and improvement strategies for the indigenous genetic resource, Malawi zebu.
Original languageEnglish
Pages (from-to)59 - 81
Number of pages23
JournalIndian Journal of Physical and Social Science
Volume2(9)
Publication statusFirst published - 2012

Fingerprint

Malawi
zebu
population structure
genetic variation
cattle
Brahman
alleles
loci
socioeconomic factors
blood
germplasm conservation
genetic resources
sampling
gene flow
herds
microsatellite repeats
farms
genetic markers
DNA

Bibliographical note

1022195

Keywords

  • Genetic diversity
  • Malawi zebu
  • Microsatellite markers

Cite this

Changadeya, W., Mbali, AJD., Nyirenda, JC., Chagunda, MGG., & Kaunda, E. (2012). Genetic diversity and population structure of Malawi zebu cattle. Indian Journal of Physical and Social Science, 2(9), 59 - 81.
Changadeya, W ; Mbali, AJD ; Nyirenda, JC ; Chagunda, MGG ; Kaunda, E. / Genetic diversity and population structure of Malawi zebu cattle. In: Indian Journal of Physical and Social Science. 2012 ; Vol. 2(9). pp. 59 - 81.
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Changadeya, W, Mbali, AJD, Nyirenda, JC, Chagunda, MGG & Kaunda, E 2012, 'Genetic diversity and population structure of Malawi zebu cattle', Indian Journal of Physical and Social Science, vol. 2(9), pp. 59 - 81.

Genetic diversity and population structure of Malawi zebu cattle. / Changadeya, W; Mbali, AJD; Nyirenda, JC; Chagunda, MGG; Kaunda, E.

In: Indian Journal of Physical and Social Science, Vol. 2(9), 2012, p. 59 - 81.

Research output: Contribution to journalArticle

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Changadeya W, Mbali AJD, Nyirenda JC, Chagunda MGG, Kaunda E. Genetic diversity and population structure of Malawi zebu cattle. Indian Journal of Physical and Social Science. 2012;2(9):59 - 81.