Post-glacial colonization of northern coastal habitat by bottlenose dolphins: A marine leading-edge expansion?

Milaja Nykänen*, Kristin Kaschner, Willy Dabin, Andrew Brownlow, Nicholas J Davison, Rob Deaville, Cristina Garilao, Kathleen Kesner-Reyes, M Thomas P Gilbert, Rod Penrose, Valentina Islas-Villanueva, Nathan Wales, Simon N Ingram, Emer Rogan, Marie Louis, Andrew D Foote

*Corresponding author for this work

Research output: Contribution to journalArticle

Abstract

Oscillations in the Earth’s temperature and the subsequent retreating and advancing of ice-sheets around the polar regions are thought to have played an important role in shaping the distribution and genetic structuring of contemporary high-latitude populations. After the Last Glacial Maximum (LGM), retreating of the ice-sheets would have enabled early colonizers to rapidly occupy suitable niches to the exclusion of other conspecifics, thereby reducing genetic diversity at the leading-edge. Bottlenose dolphins (genus Tursiops) form distinct coastal and pelagic ecotypes, with finer-scale genetic structuring observed within each ecotype. We reconstruct the postglacial colonization of the Northeast Atlantic (NEA) by bottlenose dolphins using habitat modeling and phylogenetics. The AquaMaps model hindcasted suitable habitat for the LGM in the Atlantic lower latitude waters and parts of the Mediterranean Sea. The time-calibrated phylogeny, constructed with 86 complete mitochondrial genomes including 30 generated for this study and created using a multispecies coalescent model, suggests that the expansion to the available coastal habitat in the NEA happened via founder events starting ~15 000 years ago (95% highest posterior density interval: 4 900–26 400). The founders of the 2 distinct coastal NEA populations comprised as few as 2 maternal lineages that originated from the pelagic population. The low effective population size and genetic diversity estimated for the shared ancestral coastal population subsequent to divergence from the pelagic source population are consistent with leading-edge expansion. These findings highlight the legacy of the Late Pleistocene glacial cycles on the genetic structuring and diversity of contemporary populations.
Original languageEnglish
Article numberesz039
Pages (from-to)662-674
Number of pages13
JournalJournal of Heredity
Volume110
Issue number6
Early online date17 Jun 2019
DOIs
Publication statusPrint publication - 19 Sep 2019

Fingerprint

Bottle-Nosed Dolphin
Ecosystem
Population
Ecotype
Ice Cover
Cold Climate
Mitochondrial Genome
Population Genetics
Phylogeny
Population Density
Mothers
Temperature
Water

Bibliographical note

© The American Genetic Association 2019. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Keywords

  • Last Glacial Maximum (LGM)
  • genetic diversity
  • habitat modeling
  • multispecies coalescent
  • phylogenetics
  • time-dependency

Cite this

Nykänen, Milaja ; Kaschner, Kristin ; Dabin, Willy ; Brownlow, Andrew ; Davison, Nicholas J ; Deaville, Rob ; Garilao, Cristina ; Kesner-Reyes, Kathleen ; Gilbert, M Thomas P ; Penrose, Rod ; Islas-Villanueva, Valentina ; Wales, Nathan ; Ingram, Simon N ; Rogan, Emer ; Louis, Marie ; Foote, Andrew D. / Post-glacial colonization of northern coastal habitat by bottlenose dolphins: A marine leading-edge expansion?. In: Journal of Heredity. 2019 ; Vol. 110, No. 6. pp. 662-674.
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abstract = "Oscillations in the Earth’s temperature and the subsequent retreating and advancing of ice-sheets around the polar regions are thought to have played an important role in shaping the distribution and genetic structuring of contemporary high-latitude populations. After the Last Glacial Maximum (LGM), retreating of the ice-sheets would have enabled early colonizers to rapidly occupy suitable niches to the exclusion of other conspecifics, thereby reducing genetic diversity at the leading-edge. Bottlenose dolphins (genus Tursiops) form distinct coastal and pelagic ecotypes, with finer-scale genetic structuring observed within each ecotype. We reconstruct the postglacial colonization of the Northeast Atlantic (NEA) by bottlenose dolphins using habitat modeling and phylogenetics. The AquaMaps model hindcasted suitable habitat for the LGM in the Atlantic lower latitude waters and parts of the Mediterranean Sea. The time-calibrated phylogeny, constructed with 86 complete mitochondrial genomes including 30 generated for this study and created using a multispecies coalescent model, suggests that the expansion to the available coastal habitat in the NEA happened via founder events starting ~15 000 years ago (95{\%} highest posterior density interval: 4 900–26 400). The founders of the 2 distinct coastal NEA populations comprised as few as 2 maternal lineages that originated from the pelagic population. The low effective population size and genetic diversity estimated for the shared ancestral coastal population subsequent to divergence from the pelagic source population are consistent with leading-edge expansion. These findings highlight the legacy of the Late Pleistocene glacial cycles on the genetic structuring and diversity of contemporary populations.",
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Nykänen, M, Kaschner, K, Dabin, W, Brownlow, A, Davison, NJ, Deaville, R, Garilao, C, Kesner-Reyes, K, Gilbert, MTP, Penrose, R, Islas-Villanueva, V, Wales, N, Ingram, SN, Rogan, E, Louis, M & Foote, AD 2019, 'Post-glacial colonization of northern coastal habitat by bottlenose dolphins: A marine leading-edge expansion?', Journal of Heredity, vol. 110, no. 6, esz039, pp. 662-674. https://doi.org/10.1093/jhered/esz039

Post-glacial colonization of northern coastal habitat by bottlenose dolphins: A marine leading-edge expansion? / Nykänen, Milaja; Kaschner, Kristin; Dabin, Willy; Brownlow, Andrew; Davison, Nicholas J; Deaville, Rob; Garilao, Cristina; Kesner-Reyes, Kathleen; Gilbert, M Thomas P; Penrose, Rod; Islas-Villanueva, Valentina; Wales, Nathan; Ingram, Simon N; Rogan, Emer; Louis, Marie; Foote, Andrew D.

In: Journal of Heredity, Vol. 110, No. 6, esz039, 19.09.2019, p. 662-674.

Research output: Contribution to journalArticle

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AU - Kaschner, Kristin

AU - Dabin, Willy

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AU - Davison, Nicholas J

AU - Deaville, Rob

AU - Garilao, Cristina

AU - Kesner-Reyes, Kathleen

AU - Gilbert, M Thomas P

AU - Penrose, Rod

AU - Islas-Villanueva, Valentina

AU - Wales, Nathan

AU - Ingram, Simon N

AU - Rogan, Emer

AU - Louis, Marie

AU - Foote, Andrew D

N1 - © The American Genetic Association 2019. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

PY - 2019/9/19

Y1 - 2019/9/19

N2 - Oscillations in the Earth’s temperature and the subsequent retreating and advancing of ice-sheets around the polar regions are thought to have played an important role in shaping the distribution and genetic structuring of contemporary high-latitude populations. After the Last Glacial Maximum (LGM), retreating of the ice-sheets would have enabled early colonizers to rapidly occupy suitable niches to the exclusion of other conspecifics, thereby reducing genetic diversity at the leading-edge. Bottlenose dolphins (genus Tursiops) form distinct coastal and pelagic ecotypes, with finer-scale genetic structuring observed within each ecotype. We reconstruct the postglacial colonization of the Northeast Atlantic (NEA) by bottlenose dolphins using habitat modeling and phylogenetics. The AquaMaps model hindcasted suitable habitat for the LGM in the Atlantic lower latitude waters and parts of the Mediterranean Sea. The time-calibrated phylogeny, constructed with 86 complete mitochondrial genomes including 30 generated for this study and created using a multispecies coalescent model, suggests that the expansion to the available coastal habitat in the NEA happened via founder events starting ~15 000 years ago (95% highest posterior density interval: 4 900–26 400). The founders of the 2 distinct coastal NEA populations comprised as few as 2 maternal lineages that originated from the pelagic population. The low effective population size and genetic diversity estimated for the shared ancestral coastal population subsequent to divergence from the pelagic source population are consistent with leading-edge expansion. These findings highlight the legacy of the Late Pleistocene glacial cycles on the genetic structuring and diversity of contemporary populations.

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