UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics

J Dicks; Mary Anderson; Linda Cardle; Sam Cartinhour; Matthew Couchman; Guy F Davenport; Jeremy Dickson; Mike Gale; David Marshall; Sean May; Hamish McWilliam; Andrew O'Malia; Helen Ougham; Martin Trick; Sean Walsh; Robbie Waugh

doi:10.1093/nar/28.1.104

UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics

J Dicks, Mary Anderson, Linda Cardle, Sam Cartinhour, Matthew Couchman, Guy F Davenport, Jeremy Dickson, Mike Gale, David Marshall, Sean May, Hamish McWilliam, Andrew O'Malia, Helen Ougham, Martin Trick, Sean Walsh, Robbie Waugh

Research output: Contribution to journal › Article › peer-review

15 Citations (Scopus)

Abstract

The UK Crop Plant Bioinformatics Network (UK CropNet) was established in 1996 in order to harness the extensive work in genome mapping in crop plants in the UK. Since this date we have published five databases from our central UK CropNet WWW site (http://synteny.nott.ac.uk/) with a further three to follow shortly. Our resource facilitates the identification and manipulation of agronomically important genes by laying a foundation for comparative analysis among crop plants and model species. In addition, we have developed a number of software tools that facilitate the visualisation and analysis of our data. Many of our tools are made freely available for use with both crop plant data and with data from other species.

Original language	English
Pages (from-to)	104-107
Number of pages	4
Journal	Nucleic Acids Research
Volume	28
Issue number	1
DOIs	https://doi.org/10.1093/nar/28.1.104
Publication status	Print publication - 1 Jan 2000
Externally published	Yes

Access to Document

10.1093/nar/28.1.104

Cite this

Dicks, J., Anderson, M., Cardle, L., Cartinhour, S., Couchman, M., Davenport, G. F., Dickson, J., Gale, M., Marshall, D., May, S., McWilliam, H., O'Malia, A., Ougham, H., Trick, M., Walsh, S., & Waugh, R. (2000). UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics. Nucleic Acids Research, 28(1), 104-107. https://doi.org/10.1093/nar/28.1.104

@article{778a6aec5b37481081958cc438fd4800,

title = "UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics",

abstract = "The UK Crop Plant Bioinformatics Network (UK CropNet) was established in 1996 in order to harness the extensive work in genome mapping in crop plants in the UK. Since this date we have published five databases from our central UK CropNet WWW site (http://synteny.nott.ac.uk/) with a further three to follow shortly. Our resource facilitates the identification and manipulation of agronomically important genes by laying a foundation for comparative analysis among crop plants and model species. In addition, we have developed a number of software tools that facilitate the visualisation and analysis of our data. Many of our tools are made freely available for use with both crop plant data and with data from other species.",

author = "J Dicks and Mary Anderson and Linda Cardle and Sam Cartinhour and Matthew Couchman and Davenport, {Guy F} and Jeremy Dickson and Mike Gale and David Marshall and Sean May and Hamish McWilliam and Andrew O'Malia and Helen Ougham and Martin Trick and Sean Walsh and Robbie Waugh",

year = "2000",

month = jan,

day = "1",

doi = "10.1093/nar/28.1.104",

language = "English",

volume = "28",

pages = "104--107",

journal = "Nucleic Acids Research",

issn = "0305-1048",

publisher = "Oxford University Press",

number = "1",

}

Dicks, J, Anderson, M, Cardle, L, Cartinhour, S, Couchman, M, Davenport, GF, Dickson, J, Gale, M, Marshall, D, May, S, McWilliam, H, O'Malia, A, Ougham, H, Trick, M, Walsh, S & Waugh, R 2000, 'UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics', Nucleic Acids Research, vol. 28, no. 1, pp. 104-107. https://doi.org/10.1093/nar/28.1.104

TY - JOUR

T1 - UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics

AU - Dicks, J

AU - Anderson, Mary

AU - Cardle, Linda

AU - Cartinhour, Sam

AU - Couchman, Matthew

AU - Davenport, Guy F

AU - Dickson, Jeremy

AU - Gale, Mike

AU - Marshall, David

AU - May, Sean

AU - McWilliam, Hamish

AU - O'Malia, Andrew

AU - Ougham, Helen

AU - Trick, Martin

AU - Walsh, Sean

AU - Waugh, Robbie

PY - 2000/1/1

Y1 - 2000/1/1

N2 - The UK Crop Plant Bioinformatics Network (UK CropNet) was established in 1996 in order to harness the extensive work in genome mapping in crop plants in the UK. Since this date we have published five databases from our central UK CropNet WWW site (http://synteny.nott.ac.uk/) with a further three to follow shortly. Our resource facilitates the identification and manipulation of agronomically important genes by laying a foundation for comparative analysis among crop plants and model species. In addition, we have developed a number of software tools that facilitate the visualisation and analysis of our data. Many of our tools are made freely available for use with both crop plant data and with data from other species.

AB - The UK Crop Plant Bioinformatics Network (UK CropNet) was established in 1996 in order to harness the extensive work in genome mapping in crop plants in the UK. Since this date we have published five databases from our central UK CropNet WWW site (http://synteny.nott.ac.uk/) with a further three to follow shortly. Our resource facilitates the identification and manipulation of agronomically important genes by laying a foundation for comparative analysis among crop plants and model species. In addition, we have developed a number of software tools that facilitate the visualisation and analysis of our data. Many of our tools are made freely available for use with both crop plant data and with data from other species.

UR - http://www.mendeley.com/research/uk-cropnet-collection-databases-bioinformatics-resources-crop-plant-genomics

U2 - 10.1093/nar/28.1.104

DO - 10.1093/nar/28.1.104

M3 - Article

SN - 0305-1048

VL - 28

SP - 104

EP - 107

JO - Nucleic Acids Research

JF - Nucleic Acids Research

IS - 1

ER -

UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics

Abstract

Access to Document

Other files and links

Fingerprint

Cite this